Background: Protein sequence alignment is one of the basic tools in bioinformatics. Correct alignments are required for a range of tasks including the derivation of phylogenetic t...
Tomas Ohlson, Varun Aggarwal, Arne Elofsson, Rober...
Abstract. Constrained argumentation frameworks (CAF) generalize Dung's frameworks by allowing additional constraints on arguments to be taken into account in the definition of...
We present a probabilistic algorithm that, given a connected graph G (represented by adjacency lists) of average degree d, with edge weights in the set {1, . . . , w}, and given a ...
Abstract. We continue a study initiated by Kraj´ıˇcek of a Resolutionlike proof system working with clauses of linear inequalities, R(CP). For all proof systems of this kind Kra...
Background: Multiple sequence alignment is the foundation of many important applications in bioinformatics that aim at detecting functionally important regions, predicting protein...
Virpi Ahola, Tero Aittokallio, Mauno Vihinen, Esa ...