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    » Inferring subnetworks from perturbed expression profiles
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    BMCBI
    2006
    166views more  BMCBI 2006»
    Extraction of phylogenetic network modules from the metabolic network
    13 years 7 months ago
    Extraction of phylogenetic network modules from the metabolic network
    Download  www.biomedcentral.com
    Background: In bio-systems, genes, proteins and compounds are related to each other, thus forming complex networks. Although each organism has its individual network, some organis...
    Takuji Yamada, Minoru Kanehisa, Susumu Goto
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    ACSC
    2009
    IEEE
    204views Theoretical Computer Science» more  ACSC 2009»
    Inference of Gene Expression Networks Using Memetic Gene Expression Programming
    14 years 2 months ago
    Inference of Gene Expression Networks Using Memetic Gene Expression Programming
    Download  crpit.com
    In this paper we aim to infer a model of genetic networks from time series data of gene expression profiles by using a new gene expression programming algorithm. Gene expression n...
    Armita Zarnegar, Peter Vamplew, Andrew Stranieri
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    JCB
    2007
    130views more  JCB 2007»
    Bayesian Inference of MicroRNA Targets from Sequence and Expression Data
    13 years 7 months ago
    Bayesian Inference of MicroRNA Targets from Sequence and Expression Data
    Download  morrislab.med.utoronto.ca
    MicroRNAs (miRNAs) regulate a large proportion of mammalian genes by hybridizing to targeted messenger RNAs (mRNAs) and down-regulating their translation into protein. Although mu...
    Jim C. Huang, Quaid Morris, Brendan J. Frey
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    BIBE
    2006
    IEEE
    139views Bioinformatics» more  BIBE 2006»
    A Computational Inference Framework for analyzing Gene Regulation Pathway using Microarray Data
    14 years 1 months ago
    A Computational Inference Framework for analyzing Gene Regulation Pathway using Microarray Data
    Download  www.engr.uconn.edu
    Microarray experiments produce gene expression data at such a high speed and volume that it is imperative to use highly specialized computational tools for their analyses. One grou...
    Dong-Guk Shin, John Bluis, Yoo Ah Kim, Winfried Kr...
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    BMCBI
    2007
    130views more  BMCBI 2007»
    A model-based optimization framework for the inference of regulatory interactions using time-course DNA microarray expression da
    13 years 7 months ago
    A model-based optimization framework for the inference of regulatory interactions using time-course DNA microarray expression da
    Download  www.biomedcentral.com
    Background: Proteins are the primary regulatory agents of transcription even though mRNA expression data alone, from systems like DNA microarrays, are widely used. In addition, th...
    Reuben Thomas, Carlos J. Paredes, Sanjay Mehrotra,...
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