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» Information Management for Genome Level Bioinformatics
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BMCBI
2005
246views more  BMCBI 2005»
13 years 6 months ago
ParPEST: a pipeline for EST data analysis based on parallel computing
Background: Expressed Sequence Tags (ESTs) are short and error-prone DNA sequences generated from the 5' and 3' ends of randomly selected cDNA clones. They provide an im...
Nunzio D'Agostino, Mario Aversano, Maria Luisa Chi...
BMCBI
2008
158views more  BMCBI 2008»
13 years 6 months ago
Discovering gene annotations in biomedical text databases
Currently, most of the discovered biological and biomedical knowledge is available as textual data in scientific papers. And, locating and curating information about a genomic enti...
Ali Cakmak, Gultekin Özsoyoglu
BMCBI
2007
152views more  BMCBI 2007»
13 years 6 months ago
PASSIM - an open source software system for managing information in biomedical studies
Background: One of the crucial aspects of day-to-day laboratory information management is collection, storage and retrieval of information about research subjects and biomedical s...
Juris Viksna, Edgars Celms, Martins Opmanis, Karli...
CSB
2005
IEEE
131views Bioinformatics» more  CSB 2005»
14 years 10 days ago
Current Challenges in Bioimage Database Design
Information technology research has played a significant role in the high-throughput acquisition and analysis of biological information. The tremendous amount of information gath...
Ambuj K. Singh, Arnab Bhattacharya, Vebjorn Ljosa
PRIB
2009
Springer
100views Bioinformatics» more  PRIB 2009»
14 years 1 months ago
Evidence-Based Clustering of Reads and Taxonomic Analysis of Metagenomic Data
Abstract. The rapidly emerging field of metagenomics seeks to examine the genomic content of communities of organisms to understand their roles and interactions in an ecosystem. I...
Gianluigi Folino, Fabio Gori, Mike S. M. Jetten, E...