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» Information Retrieval with Cluster Genetic
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SIGMOD
2007
ACM
169views Database» more  SIGMOD 2007»
14 years 8 months ago
Genome-scale disk-based suffix tree indexing
With the exponential growth of biological sequence databases, it has become critical to develop effective techniques for storing, querying, and analyzing these massive data. Suffi...
Benjarath Phoophakdee, Mohammed J. Zaki
BMCBI
2007
155views more  BMCBI 2007»
13 years 8 months ago
ProCMD: a database and 3D web resource for protein C mutants
Background: Activated Protein C (ProC) is an anticoagulant plasma serine protease which also plays an important role in controlling inflammation and cell proliferation. Several mu...
Pasqualina D'Ursi, Francesca Marino, Andrea Caprer...
SISAP
2010
IEEE
135views Data Mining» more  SISAP 2010»
13 years 6 months ago
Improving the similarity search of tandem mass spectra using metric access methods
In biological applications, the tandem mass spectrometry is a widely used method for determining protein and peptide sequences from an ”in vitro” sample. The sequences are not...
Jiri Novák, Tomás Skopal, David Hoks...
WWW
2006
ACM
14 years 8 months ago
WS-replication: a framework for highly available web services
Due to the rapid acceptance of web services and its fast spreading, a number of mission-critical systems will be deployed as web services in next years. The availability of those ...
Jorge Salas, Francisco Perez-Sorrosal, Marta Pati&...
NAR
2011
257views Computer Vision» more  NAR 2011»
12 years 10 months ago
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored
An essential prerequisite for any systems-level understanding of cellular functions is to correctly uncover and annotate all functional interactions among proteins in the cell. To...
Damian Szklarczyk, Andrea Franceschini, Michael Ku...