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    BMCBI
    2008
    118views more  BMCBI 2008»
    Evaluation of phylogenetic footprint discovery for predicting bacterial cis-regulatory elements and revealing their evolution
    13 years 8 months ago
    Evaluation of phylogenetic footprint discovery for predicting bacterial cis-regulatory elements and revealing their evolution
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    Background: The detection of conserved motifs in promoters of orthologous genes (phylogenetic footprints) has become a common strategy to predict cis-acting regulatory elements. S...
    Rekin's Janky, Jacques van Helden
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    BMCBI
    2008
    146views more  BMCBI 2008»
    A phase synchronization clustering algorithm for identifying interesting groups of genes from cell cycle expression data
    13 years 8 months ago
    A phase synchronization clustering algorithm for identifying interesting groups of genes from cell cycle expression data
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    Background: The previous studies of genome-wide expression patterns show that a certain percentage of genes are cell cycle regulated. The expression data has been analyzed in a nu...
    Chang Sik Kim, Cheol Soo Bae, Hong Joon Tcha
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    BMCBI
    2007
    176views more  BMCBI 2007»
    Genome Expression Pathway Analysis Tool - Analysis and visualization of microarray gene expression data under genomic, proteomic
    13 years 8 months ago
    Genome Expression Pathway Analysis Tool - Analysis and visualization of microarray gene expression data under genomic, proteomic
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    Background: Regulation of gene expression is relevant to many areas of biology and medicine, in the study of treatments, diseases, and developmental stages. Microarrays can be use...
    Markus Weniger, Julia C. Engelmann, Jörg Schu...
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    BMCBI
    2007
    181views more  BMCBI 2007»
    Versatile annotation and publication quality visualization of protein complexes using POLYVIEW-3D
    13 years 8 months ago
    Versatile annotation and publication quality visualization of protein complexes using POLYVIEW-3D
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    Background: Macromolecular visualization as well as automated structural and functional annotation tools play an increasingly important role in the post-genomic era, contributing ...
    Aleksey A. Porollo, Jaroslaw Meller
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    BMCBI
    2008
    114views more  BMCBI 2008»
    Indel PDB: A database of structural insertions and deletions derived from sequence alignments of closely related proteins
    13 years 8 months ago
    Indel PDB: A database of structural insertions and deletions derived from sequence alignments of closely related proteins
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    Background: Insertions and deletions (indels) represent a common type of sequence variations, which are less studied and pose many important biological questions. Recent research ...
    Michael Hsing, Artem Cherkasov
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