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COMPLIFE
2005
Springer
14 years 1 months ago
Fast and Accurate Structural RNA Alignment by Progressive Lagrangian Optimization
During the last few years new functionalities of RNA have been discovered, renewing the need for computational tools for their analysis. To this respect, multiple sequence alignmen...
Markus Bauer, Gunnar W. Klau, Knut Reinert
SAC
2009
ACM
14 years 2 months ago
Exploiting weak dependencies in tree-based search
In this work, our objective is to heuristically discover a simplified form of functional dependencies between variables called weak dependencies. Once discovered, these relations...
Alejandro Arbelaez, Youssef Hamadi
BMCBI
2007
113views more  BMCBI 2007»
13 years 7 months ago
Statistical power of phylo-HMM for evolutionarily conserved element detection
Background: An important goal of comparative genomics is the identification of functional elements through conservation analysis. Phylo-HMM was recently introduced to detect conse...
Xiaodan Fan, Jun Zhu, Eric E. Schadt, Jun S. Liu
ICML
2005
IEEE
14 years 8 months ago
Supervised dimensionality reduction using mixture models
Given a classification problem, our goal is to find a low-dimensional linear transformation of the feature vectors which retains information needed to predict the class labels. We...
Sajama, Alon Orlitsky
HPCA
1995
IEEE
13 years 11 months ago
Program Balance and Its Impact on High Performance RISC Architectures
Information on the behavior of programs is essential for deciding the number and nature of functional units in high performance architectures. In this paper, we present studies on...
Lizy Kurian John, Vinod Reddy, Paul T. Hulina, Lee...