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BMCBI
2006
172views more  BMCBI 2006»
13 years 8 months ago
BioWarehouse: a bioinformatics database warehouse toolkit
Background: This article addresses the problem of interoperation of heterogeneous bioinformatics databases. Results: We introduce BioWarehouse, an open source toolkit for construc...
Thomas J. Lee, Yannick Pouliot, Valerie Wagner, Pr...
EDBT
2008
ACM
166views Database» more  EDBT 2008»
14 years 8 months ago
A novel spectral coding in a large graph database
Retrieving related graphs containing a query graph from a large graph database is a key issue in many graph-based applications, such as drug discovery and structural pattern recog...
Lei Zou, Lei Chen 0002, Jeffrey Xu Yu, Yansheng Lu
SSDBM
2011
IEEE
239views Database» more  SSDBM 2011»
13 years 6 days ago
Recipes for Baking Black Forest Databases - Building and Querying Black Hole Merger Trees from Cosmological Simulations
Large-scale N-body simulations play an important role in advancing our understanding of the formation and evolution of large structures in the universe. These computations require ...
Julio López, Colin Degraf, Tiziana DiMatteo...
SIGMOD
2006
ACM
156views Database» more  SIGMOD 2006»
14 years 8 months ago
MauveDB: supporting model-based user views in database systems
Real-world data -- especially when generated by distributed measurement infrastructures such as sensor networks -- tends to be incomplete, imprecise, and erroneous, making it impo...
Amol Deshpande, Samuel Madden
BMCBI
2010
163views more  BMCBI 2010»
13 years 8 months ago
Reduced representation of protein structure: implications on efficiency and scope of detection of structural similarity
Background: Computational comparison of two protein structures is the starting point of many methods that build on existing knowledge, such as structure modeling (including modeli...
Zong Hong Zhang, Hwee Kuan Lee, Ivana Mihalek