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» Large scale genomic sequence SVM classifiers
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BMCBI
2005
115views more  BMCBI 2005»
13 years 10 months ago
MPrime: efficient large scale multiple primer and oligonucleotide design for customized gene microarrays
Background: Enhancements in sequencing technology have recently yielded assemblies of large genomes including rat, mouse, human, fruit fly, and zebrafish. The availability of larg...
Eric C. Rouchka, Abdelnaby Khalyfa, Nigel G. F. Co...
BMCBI
2008
220views more  BMCBI 2008»
13 years 11 months ago
Gene prediction in metagenomic fragments: A large scale machine learning approach
Background: Metagenomics is an approach to the characterization of microbial genomes via the direct isolation of genomic sequences from the environment without prior cultivation. ...
Katharina J. Hoff, Maike Tech, Thomas Lingner, Rol...
IPPS
2005
IEEE
14 years 4 months ago
High-Performance Direct Pairwise Comparison of Large Genomic Sequences
Many applications in Comparative Genomics lend themselves to implementations that take advantage of common high-performance features in modern microprocessors. However, the common...
Christopher Mueller, Mehmet M. Dalkilic, Andrew Lu...
KDD
2009
ACM
158views Data Mining» more  KDD 2009»
14 years 11 months ago
Feature shaping for linear SVM classifiers
: ? Feature Shaping for Linear SVM Classifiers George Forman, Martin Scholz, Shyamsundar Rajaram HP Laboratories HPL-2009-31R1 text classification machine learning, feature weighti...
George Forman, Martin Scholz, Shyamsundar Rajaram
ISMB
2008
14 years 1 months ago
Classification of arrayCGH data using fused SVM
Motivation: Array-based comparative genomic hybridization (arrayCGH) has recently become a popular tool to identify DNA copy number variations along the genome. These profiles are...
Franck Rapaport, Emmanuel Barillot, Jean-Philippe ...