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BMCBI
2007
128views more  BMCBI 2007»
13 years 8 months ago
A robust and efficient algorithm for the shape description of protein structures and its application in predicting ligand bindin
Background: An accurate description of protein shape derived from protein structure is necessary to establish an understanding of protein-ligand interactions, which in turn will l...
Lei Xie, Philip E. Bourne
CORR
2010
Springer
143views Education» more  CORR 2010»
13 years 8 months ago
Expressiveness of Generic Process Shape Types
METAI is a generic process calculus that can be instantiated by supplying rewriting rules defining an operational semantics to make numerous process calculi such as the -calculus,...
Jan Jakubuv, J. B. Wells
VISSYM
2004
13 years 9 months ago
Shape-Embedded-Histograms for Visual Data Mining
Scatterplots are widely used in exploratory data analysis and class visualization. The advantages of scatterplots are that they are easy to understand and allow the user to draw c...
Amihood Amir, Reuven Kashi, Daniel A. Keim, Nathan...
DNA
2006
Springer
146views Bioinformatics» more  DNA 2006»
13 years 11 months ago
On Times to Compute Shapes in 2D Tile Self-assembly
We study the times to grow structures within the tile self-assembly model proposed by Winfree, and the possible shapes that can be achieved. Our earlier work was confined to the g...
Yuliy M. Baryshnikov, Edward G. Coffman Jr., Boons...
SODA
2010
ACM
143views Algorithms» more  SODA 2010»
13 years 6 months ago
Thin Partitions: Isoperimetric Inequalities and a Sampling Algorithm for Star Shaped Bodies
Star-shaped bodies are an important nonconvex generalization of convex bodies (e.g., linear programming with violations). Here we present an efficient algorithm for sampling a giv...
Karthekeyan Chandrasekaran, Daniel Dadush, Santosh...