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RECOMB
2005
Springer
16 years 4 months ago
Predicting Protein-Peptide Binding Affinity by Learning Peptide-Peptide Distance Functions
Many important cellular response mechanisms are activated when a peptide binds to an appropriate receptor. In the immune system, the recognition of pathogen peptides begins when th...
Chen Yanover, Tomer Hertz
BMCBI
2006
111views more  BMCBI 2006»
15 years 4 months ago
PepDist: A New Framework for Protein-Peptide Binding Prediction based on Learning Peptide Distance Functions
Background: Many different aspects of cellular signalling, trafficking and targeting mechanisms are mediated by interactions between proteins and peptides. Representative examples...
Tomer Hertz, Chen Yanover
AAAI
1998
15 years 5 months ago
Learning Evaluation Functions for Global Optimization and Boolean Satisfiability
This paper describes STAGE, a learning approach to automatically improving search performance on optimization problems.STAGElearns an evaluation function which predicts the outcom...
Justin A. Boyan, Andrew W. Moore
RECOMB
2007
Springer
16 years 4 months ago
Minimizing and Learning Energy Functions for Side-Chain Prediction
Abstract. Side-chain prediction is an important subproblem of the general protein folding problem. Despite much progress in side-chain prediction, performance is far from satisfact...
Chen Yanover, Ora Schueler-Furman, Yair Weiss
NIPS
1990
15 years 5 months ago
Bumptrees for Efficient Function, Constraint and Classification Learning
A new class of data structures called "bumptrees" is described. These structures are useful for efficiently implementing a number of neural network related operations. A...
Stephen M. Omohundro