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» Learning for Sequence Extraction Tasks
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BMCBI
2010
86views more  BMCBI 2010»
13 years 9 months ago
Mining protein loops using a structural alphabet and statistical exceptionality
Background: Protein loops encompass 50% of protein residues in available three-dimensional structures. These regions are often involved in protein functions, e.g. binding site, ca...
Leslie Regad, Juliette Martin, Grégory Nuel...
RECOMB
2004
Springer
14 years 9 months ago
Predicting Genetic Regulatory Response Using Classification: Yeast Stress Response
We present a novel classification-based algorithm called GeneClass for learning to predict gene regulatory response. Our approach is motivated by the hypothesis that in simple orga...
Manuel Middendorf, Anshul Kundaje, Chris Wiggins, ...
BMCBI
2010
119views more  BMCBI 2010»
13 years 9 months ago
Multi-task learning for cross-platform siRNA efficacy prediction: an in-silico study
Background: Gene silencing using exogenous small interfering RNAs (siRNAs) is now a widespread molecular tool for gene functional study and new-drug target identification. The key...
Qi Liu, Qian Xu, Vincent Wenchen Zheng, Hong Xue, ...
ICANN
2005
Springer
14 years 2 months ago
A Neural Network Model for Inter-problem Adaptive Online Time Allocation
One aim of Meta-learning techniques is to minimize the time needed for problem solving, and the effort of parameter hand-tuning, by automating algorithm selection. The predictive m...
Matteo Gagliolo, Jürgen Schmidhuber
WWW
2009
ACM
14 years 9 months ago
Measuring the similarity between implicit semantic relations from the web
Measuring the similarity between semantic relations that hold among entities is an important and necessary step in various Web related tasks such as relation extraction, informati...
Danushka Bollegala, Yutaka Matsuo, Mitsuru Ishizuk...