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PDPTA
2007
15 years 5 months ago
Scheduling Divisible Workloads from Multiple Sources in Linear Daisy Chain Networks
— This paper considers scheduling divisible workloads from multiple sources in linear networks of processors. We propose a two phase scheduling strategy (TPSS) to minimize the ov...
Xinxin Liu, Han Zhao, Xiaolin Li
RECOMB
2009
Springer
15 years 11 months ago
Rearrangement Models and Single-Cut Operations
Abstract. There have been many widely used genome rearrangement models, such as reversals, HannenhalliPevzner, and double-cut and join. Though each one can be precisely defined, t...
Paul Medvedev, Jens Stoye
HICSS
2003
IEEE
90views Biometrics» more  HICSS 2003»
15 years 9 months ago
A Prototype for Multiple Whole Genome Alignment
In this paper, we briefly describe a prototype of the software system we have developed for multiple whole genome alignment. To develop our algorithm, we have to solve several pr...
Jitender S. Deogun, Fangrui Ma, Jingyi Yang, Andre...
DCC
2011
IEEE
14 years 11 months ago
Tree Structure Compression with RePair
Larsson and Moffat’s RePair algorithm is generalized from strings to trees. The new algorithm (TreeRePair) produces straight-line linear context-free tree (SLT) grammars which a...
Markus Lohrey, Sebastian Maneth, Roy Mennicke
CCCG
2008
15 years 5 months ago
Triangulating and Guarding Realistic Polygons
We propose a new model of realistic input: k-guardable objects. An object is k-guardable if its boundary can be seen by k guards in the interior of the object. In this abstract, w...
Greg Aloupis, Prosenjit Bose, Vida Dujmovic, Chris...