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BMCBI
2005
106views more  BMCBI 2005»
13 years 8 months ago
A multistep bioinformatic approach detects putative regulatory elements in gene promoters
Background: Searching for approximate patterns in large promoter sequences frequently produces an exceedingly high numbers of results. Our aim was to exploit biological knowledge ...
Stefania Bortoluzzi, Alessandro Coppe, Andrea Biso...
ICDE
2008
IEEE
146views Database» more  ICDE 2008»
14 years 9 months ago
Explaining and Reformulating Authority Flow Queries
Authority flow is an effective ranking mechanism for answering queries on a broad class of data. Systems have been developed to apply this principle on the Web (PageRank and topic ...
Ramakrishna Varadarajan, Vagelis Hristidis, Louiqa...
BMCBI
2006
178views more  BMCBI 2006»
13 years 8 months ago
MannDB - A microbial database of automated protein sequence analyses and evidence integration for protein characterization
Background: MannDB was created to meet a need for rapid, comprehensive automated protein sequence analyses to support selection of proteins suitable as targets for driving the dev...
Carol L. Ecale Zhou, Marisa Lam, Jason Smith, Adam...
BMCBI
2010
223views more  BMCBI 2010»
13 years 3 months ago
MetNetGE: interactive views of biological networks and ontologies
Background: Linking high-throughput experimental data with biological networks is a key step for understanding complex biological systems. Currently, visualization tools for large...
Ming Jia, Suh-Yeon Choi, Dirk Reiners, Eve Syrkin ...
BMCBI
2010
125views more  BMCBI 2010»
13 years 8 months ago
Compartmentalization of the Edinburgh Human Metabolic Network
Background: Direct in vivo investigation of human metabolism is complicated by the distinct metabolic functions of various sub-cellular organelles. Diverse micro-environments in d...
Tong Hao, Hongwu Ma, Xue-Ming Zhao, Igor Goryanin