243 search results - page 14 / 49 » Logic-Statistic Models with Constraints for Biological Seque... |
BMCBI
2007
13 years 7 months ago
2007
Background: Current approaches to parameter estimation are often inappropriate or inconvenient for the modelling of complex biological systems. For systems described by nonlinear ...
RECOMB
2002
Springer
14 years 8 months ago
2002
Springer
We develop techniques to estimate the statistical significance of gap-free alignments between two genomic DNA sequences, using human-mouse alignments as an example. The sequences ...
VLSISP
2010
13 years 2 months ago
2010
We propose a new parallelization scheme for the hmmsearch function of the HMMER software, in order to target FPGA technology. hmmsearch is a very compute intensive software for bio...
BMCBI
2002
13 years 7 months ago
2002
Background: Most profile and motif databases strive to classify protein sequences into a broad spectrum of protein families. The next step of such database studies should include ...
BIOINFORMATICS
2010
13 years 7 months ago
2010
Motivation: To test whether protein folding constraints and secondary structure sequence preferences significantly reduce the space of amino acid words in proteins, we compared th...