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BMCBI
2006
143views more  BMCBI 2006»
13 years 9 months ago
Discovering functional gene expression patterns in the metabolic network of Escherichia coli with wavelets transforms
Background: Microarray technology produces gene expression data on a genomic scale for an endless variety of organisms and conditions. However, this vast amount of information nee...
Rainer König, Gunnar Schramm, Marcus Oswald, ...
BMCBI
2007
145views more  BMCBI 2007»
13 years 9 months ago
Improved benchmarks for computational motif discovery
Background: An important step in annotation of sequenced genomes is the identification of transcription factor binding sites. More than a hundred different computational methods h...
Geir Kjetil Sandve, Osman Abul, Vegard Walseng, Fi...
NLE
2008
108views more  NLE 2008»
13 years 9 months ago
Using automatically labelled examples to classify rhetorical relations: an assessment
Being able to identify which rhetorical relations (e.g., contrast or explanation) hold between spans of text is important for many natural language processing applications. Using ...
Caroline Sporleder, Alex Lascarides
IJPRAI
2010
151views more  IJPRAI 2010»
13 years 8 months ago
Structure-Embedded AUC-SVM
: AUC-SVM directly maximizes the area under the ROC curve (AUC) through minimizing its hinge loss relaxation, and the decision function is determined by those support vector sample...
Yunyun Wang, Songcan Chen, Hui Xue
NAR
2011
241views Computer Vision» more  NAR 2011»
13 years 4 months ago
PRIDB: a protein-RNA interface database
The Protein–RNA Interface Database (PRIDB) is a comprehensive database of protein–RNA interfaces extracted from complexes in the Protein Data Bank (PDB). It is designed to fac...
Benjamin A. Lewis, Rasna R. Walia, Michael Terribi...