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MOBICOM
2010
ACM
13 years 7 months ago
Differential forms for target tracking and aggregate queries in distributed networks
Consider mobile targets moving in a plane and their movements being monitored by a network such as a field of sensors. We develop distributed algorithms for in-network tracking an...
Rik Sarkar, Jie Gao
BMCBI
2010
123views more  BMCBI 2010»
13 years 7 months ago
Decoding HMMs using the k best paths: algorithms and applications
Background: Traditional algorithms for hidden Markov model decoding seek to maximize either the probability of a state path or the number of positions of a sequence assigned to th...
Daniel G. Brown 0001, Daniil Golod
BMCBI
2007
166views more  BMCBI 2007»
13 years 7 months ago
PathFinder: mining signal transduction pathway segments from protein-protein interaction networks
Background: A Signal transduction pathway is the chain of processes by which a cell converts an extracellular signal into a response. In most unicellular organisms, the number of ...
Gürkan Bebek, Jiong Yang
BMCBI
2010
126views more  BMCBI 2010»
13 years 7 months ago
GeneBrowser 2: an application to explore and identify common biological traits in a set of genes
Background: The development of high-throughput laboratory techniques created a demand for computer-assisted result analysis tools. Many of these techniques return lists of genes w...
Joel Arrais, João Fernandes, João Pe...
BMCBI
2008
137views more  BMCBI 2008»
13 years 7 months ago
Evading the annotation bottleneck: using sequence similarity to search non-sequence gene data
Background: Non-sequence gene data (images, literature, etc.) can be found in many different public databases. Access to these data is mostly by text based methods using gene name...
Michael J. Gilchrist, Mikkel B. Christensen, Richa...