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» Maximum entropy methods for biological sequence modeling
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ICDM
2008
IEEE
130views Data Mining» more  ICDM 2008»
14 years 3 months ago
Inference Analysis in Privacy-Preserving Data Re-publishing
Privacy-Preserving Data Re-publishing (PPDR) deals with publishing microdata in dynamic scenarios. Due to privacy concerns, data must be disguised before being published. Research...
Guan Wang, Zutao Zhu, Wenliang Du, Zhouxuan Teng
ISMB
2000
13 years 10 months ago
A Probabilistic Learning Approach to Whole-Genome Operon Prediction
We present a computational approach to predicting operons in the genomes of prokaryotic organisms. Our approach uses machine learning methods to induce predictive models for this ...
Mark Craven, David Page, Jude W. Shavlik, Joseph B...
COCOON
2008
Springer
13 years 11 months ago
Quasi-bicliques: Complexity and Binding Pairs
Abstract. Protein-protein interactions (PPIs) are one of the most important mechanisms in cellular processes. To model protein interaction sites, recent studies have suggested to f...
Xiaowen Liu, Jinyan Li, Lusheng Wang
BMCBI
2007
158views more  BMCBI 2007»
13 years 9 months ago
Penalized likelihood for sparse contingency tables with an application to full-length cDNA libraries
Background: The joint analysis of several categorical variables is a common task in many areas of biology, and is becoming central to systems biology investigations whose goal is ...
Corinne Dahinden, Giovanni Parmigiani, Mark C. Eme...
CORR
2006
Springer
87views Education» more  CORR 2006»
13 years 9 months ago
Synchronization recovery and state model reduction for soft decoding of variable length codes
Abstract-- Variable length codes (VLCs) exhibit desynchronization problems when transmitted over noisy channels. Trellis decoding techniques based on Maximum A Posteriori (MAP) est...
Simon Malinowski, Herve Jegou, Christine Guillemot