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NIPS
2004
13 years 9 months ago
Hierarchical Eigensolver for Transition Matrices in Spectral Methods
We show how to build hierarchical, reduced-rank representation for large stochastic matrices and use this representation to design an efficient algorithm for computing the largest...
Chakra Chennubhotla, Allan D. Jepson
DAC
2010
ACM
13 years 8 months ago
Parallel multigrid preconditioning on graphics processing units (GPUs) for robust power grid analysis
Leveraging the power of nowadays graphics processing units for robust power grid simulation remains a challenging task. Existing preconditioned iterative methods that require inco...
Zhuo Feng, Zhiyu Zeng
BMCBI
2010
130views more  BMCBI 2010»
13 years 8 months ago
Amino acid "little Big Bang": Representing amino acid substitution matrices as dot products of Euclidian vectors
Background: Sequence comparisons make use of a one-letter representation for amino acids, the necessary quantitative information being supplied by the substitution matrices. This ...
Karel Zimmermann, Jean-François Gibrat
BMCBI
2007
174views more  BMCBI 2007»
13 years 8 months ago
Normalization method for metabolomics data using optimal selection of multiple internal standards
Background: Success of metabolomics as the phenotyping platform largely depends on its ability to detect various sources of biological variability. Removal of platform-specific so...
Marko Sysi-Aho, Mikko Katajamaa, Laxman Yetukuri, ...
JPDC
2008
138views more  JPDC 2008»
13 years 8 months ago
Efficient parallel implementation of iterative reconstruction algorithms for electron tomography
Electron tomography (ET) combines electron microscopy and the principles of tomographic imaging in order to reconstruct the threedimensional structure of complex biological specim...
José-Jesús Fernández, Dan Gor...