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CIBCB
2005
IEEE
14 years 2 months ago
Artificial Neural Network Analysis of DNA Microarray-based Prostate Cancer Recurrence
— DNA microarray-based gene expression profiles have been established for a variety of adult cancers. This paper addresses application of an artificial neural network (ANN) wit...
Leif E. Peterson, Mustafa Ozen, Halime Erdem, Andr...
BMCBI
2007
180views more  BMCBI 2007»
13 years 8 months ago
Splicy: a web-based tool for the prediction of possible alternative splicing events from Affymetrix probeset data
Background: The Affymetrix™ technology is nowadays a well-established method for the analysis of gene expression profiles in cancer research studies. However, changes in gene ex...
Davide Rambaldi, Barbara Felice, Viviane Praz, Phi...
BMCBI
2006
173views more  BMCBI 2006»
13 years 8 months ago
Kernel-based distance metric learning for microarray data classification
Background: The most fundamental task using gene expression data in clinical oncology is to classify tissue samples according to their gene expression levels. Compared with tradit...
Huilin Xiong, Xue-wen Chen
ACSC
2005
IEEE
14 years 2 months ago
Integer Programming Models and Algorithms for Molecular Classification of Cancer from Microarray Data
Novel, high-throughput technologies are challenging the core of algorithmic methods available in Computer Science. Microarray technologies give Life Sciences researchers the oppor...
Regina Berretta, Alexandre Mendes, Pablo Moscato
BMCBI
2008
126views more  BMCBI 2008»
13 years 9 months ago
GeneChaser: Identifying all biological and clinical conditions in which genes of interest are differentially expressed
Background: The amount of gene expression data in the public repositories, such as NCBI Gene Expression Omnibus (GEO) has grown exponentially, and provides a gold mine for bioinfo...
Rong Chen, Rohan Mallelwar, Ajit Thosar, Shivkumar...