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BMCBI
2010
122views more  BMCBI 2010»
13 years 10 months ago
Fast and accurate protein substructure searching with simulated annealing and GPUs
Background: Searching a database of protein structures for matches to a query structure, or occurrences of a structural motif, is an important task in structural biology and bioin...
Alex Stivala, Peter J. Stuckey, Anthony Wirth
MSR
2011
ACM
13 years 1 months ago
An empirical analysis of the FixCache algorithm
The FixCache algorithm, introduced in 2007, effectively identifies files or methods which are likely to contain bugs by analyzing source control repository history. However, many ...
Caitlin Sadowski, Chris Lewis 0002, Zhongpeng Lin,...
FLAIRS
2009
13 years 8 months ago
Multiagent Bayesian Forecasting of Time Series with Graphical Models
Time series are found widely in engineering and science. We study multiagent forecasting in time series, drawing from literature on time series, graphical models, and multiagent s...
Yang Xiang, James Smith, Jeff Kroes
ICCAD
1997
IEEE
121views Hardware» more  ICCAD 1997»
14 years 2 months ago
Adaptive methods for netlist partitioning
An algorithm that remains in use at the core of many partitioning systems is the Kernighan-Lin algorithm and a variant the Fidducia-Matheysses (FM) algorithm. To understand the FM...
Wray L. Buntine, Lixin Su, A. Richard Newton, Andr...
GECCO
2007
Springer
191views Optimization» more  GECCO 2007»
14 years 4 months ago
One-test-at-a-time heuristic search for interaction test suites
Algorithms for the construction of software interaction test suites have focussed on the special case of pairwise coverage; less is known about efficiently constructing test suite...
Renée C. Bryce, Charles J. Colbourn