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» Methods in biomedical ontology
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BMCBI
2011
13 years 2 months ago
Errors in CGAP xProfiler and cDNA DGED: the importance of library parsing and gene selection algorithms
Background: The Cancer Genome Anatomy Project (CGAP) xProfiler and cDNA Digital Gene Expression Displayer (DGED) have been made available to the scientific community over a decade...
Andrew T. Milnthorpe, Mikhail Soloviev
NAR
2011
225views Computer Vision» more  NAR 2011»
12 years 10 months ago
IsoBase: a database of functionally related proteins across PPI networks
We describe IsoBase, a database identifying functionally related proteins, across five major eukaryotic model organisms: Saccharomyces cerevisiae, Drosophila melanogaster, Caenorh...
Daniel Park, Rohit Singh, Michael Baym, Chung-Shou...
WWW
2005
ACM
14 years 8 months ago
A service creation environment based on end to end composition of Web services
The demand for quickly delivering new applications is increasingly becoming a business imperative today. Application development is often done in an ad hoc manner, without standar...
Vikas Agarwal, Koustuv Dasgupta, Neeran M. Karnik,...
KDD
2009
ACM
219views Data Mining» more  KDD 2009»
14 years 8 months ago
Structured correspondence topic models for mining captioned figures in biological literature
A major source of information (often the most crucial and informative part) in scholarly articles from scientific journals, proceedings and books are the figures that directly pro...
Amr Ahmed, Eric P. Xing, William W. Cohen, Robert ...
WWW
2010
ACM
14 years 2 months ago
Stop thinking, start tagging: tag semantics emerge from collaborative verbosity
Recent research provides evidence for the presence of emergent semantics in collaborative tagging systems. While several methods have been proposed, little is known about the fact...
Christian Körner, Dominik Benz, Andreas Hotho...