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DMKD
2003
ACM
96views Data Mining» more  DMKD 2003»
14 years 25 days ago
Using transposition for pattern discovery from microarray data
We analyze expression matrices to identify a priori interesting sets of genes, e.g., genes that are frequently co-regulated. Such matrices provide expression values for given biol...
François Rioult, Jean-François Bouli...
JDCTA
2010
225views more  JDCTA 2010»
13 years 2 months ago
Multi-Level Weighted Sequential Pattern Mining Based on Prime Encoding
Encoding can express the hierarchical relationship in the area of mining the multi-level sequential pattern, up to now all the algorithms of which find frequent sequences just acc...
Yun Li, Lianglei Sun, Jiang Yin, Wenyan Bao, Mengy...
BMCBI
2008
160views more  BMCBI 2008»
13 years 7 months ago
Cross-species and cross-platform gene expression studies with the Bioconductor-compliant R package 'annotationTools'
Background: The variety of DNA microarray formats and datasets presently available offers an unprecedented opportunity to perform insightful comparisons of heterogeneous data. Cro...
Alexandre Kuhn, Ruth Luthi-Carter, Mauro Delorenzi
BMCBI
2007
147views more  BMCBI 2007»
13 years 7 months ago
Predicting combinatorial binding of transcription factors to regulatory elements in the human genome by association rule mining
Background: Cis-acting transcriptional regulatory elements in mammalian genomes typically contain specific combinations of binding sites for various transcription factors. Althoug...
Xochitl C. Morgan, Shulin Ni, Daniel P. Miranker, ...
FUIN
2008
136views more  FUIN 2008»
13 years 7 months ago
Multi-Dimensional Relational Sequence Mining
The issue addressed in this paper concerns the discovery of frequent multi-dimensional patterns from relational sequences. The great variety of applications of sequential pattern m...
Floriana Esposito, Nicola Di Mauro, Teresa Maria A...