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PE
2002
Springer
124views Optimization» more  PE 2002»
13 years 7 months ago
Continuous-time hidden Markov models for network performance evaluation
In this paper, we study the use of continuous-time hidden Markov models (CT-HMMs) for network protocol and application performance evaluation. We develop an algorithm to infer the...
Wei Wei, Bing Wang, Donald F. Towsley
JMLR
2010
158views more  JMLR 2010»
13 years 2 months ago
Topology Selection in Graphical Models of Autoregressive Processes
An algorithm is presented for topology selection in graphical models of autoregressive Gaussian time series. The graph topology of the model represents the sparsity pattern of the...
Jitkomut Songsiri, Lieven Vandenberghe
BMCBI
2006
116views more  BMCBI 2006»
13 years 7 months ago
Optimized mixed Markov models for motif identification
Background: Identifying functional elements, such as transcriptional factor binding sites, is a fundamental step in reconstructing gene regulatory networks and remains a challengi...
Weichun Huang, David M. Umbach, Uwe Ohler, Leping ...
CMSB
2007
Springer
14 years 1 months ago
Context Sensitivity in Logical Modeling with Time Delays
For modeling and analyzing regulatory networks based on qualitative information and possibly additional temporal constraints, approaches using hybrid automata can be very helpful. ...
Heike Siebert, Alexander Bockmayr
BMCBI
2007
114views more  BMCBI 2007»
13 years 7 months ago
Mining and state-space modeling and verification of sub-networks from large-scale biomolecular networks
Background: Biomolecular networks dynamically respond to stimuli and implement cellular function. Understanding these dynamic changes is the key challenge for cell biologists. As ...
Xiaohua Hu, Fang-Xiang Wu