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BMCBI
2008
136views more  BMCBI 2008»
13 years 6 months ago
GPAT: Retrieval of genomic annotation from large genomic position datasets
Background: Recent genome wide transcription factor binding site or chromatin modification mapping analysis techniques, such as chromatin immunoprecipitation (ChIP) linked to DNA ...
Arnaud Krebs, Mattia Frontini, Làszlò...
BMCBI
2005
124views more  BMCBI 2005»
13 years 6 months ago
Tools enabling the elucidation of molecular pathways active in human disease: Application to Hepatitis C virus infection
Background: The extraction of biological knowledge from genome-scale data sets requires its analysis in the context of additional biological information. The importance of integra...
David J. Reiss, Iliana Avila-Campillo, Vesteinn Th...
IDA
2007
Springer
14 years 26 days ago
Compact and Understandable Descriptions of Mixtures of Bernoulli Distributions
Abstract. Finite mixture models can be used in estimating complex, unknown probability distributions and also in clustering data. The parameters of the models form a complex repres...
Jaakko Hollmén, Jarkko Tikka
BMCBI
2008
127views more  BMCBI 2008»
13 years 6 months ago
Gene and pathway identification with Lp penalized Bayesian logistic regression
Background: Identifying genes and pathways associated with diseases such as cancer has been a subject of considerable research in recent years in the area of bioinformatics and co...
Zhenqiu Liu, Ronald B. Gartenhaus, Ming Tan, Feng ...
BMCBI
2008
114views more  BMCBI 2008»
13 years 6 months ago
Partial mixture model for tight clustering of gene expression time-course
Background: Tight clustering arose recently from a desire to obtain tighter and potentially more informative clusters in gene expression studies. Scattered genes with relatively l...
Yinyin Yuan, Chang-Tsun Li, Roland Wilson