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BMCBI
2007
157views more  BMCBI 2007»
13 years 8 months ago
Statistical learning of peptide retention behavior in chromatographic separations: a new kernel-based approach for computational
Background: High-throughput peptide and protein identification technologies have benefited tremendously from strategies based on tandem mass spectrometry (MS/MS) in combination wi...
Nico Pfeifer, Andreas Leinenbach, Christian G. Hub...
WSC
2004
13 years 9 months ago
On-Demand Computation of Policy Based Routes for Large-Scale Network Simulation
Routing table storage demands pose a significant obstacle for large-scale network simulation. On-demand computation of routes can alleviate those problems for models that do not r...
Michael Liljenstam, David M. Nicol
IPPS
1998
IEEE
14 years 4 days ago
Benchmarking the Task Graph Scheduling Algorithms
The problem of scheduling a weighted directed acyclic graph (DAG) to a set of homogeneous processors to minimize the completion time has been extensively studied. The NPcompletene...
Yu-Kwong Kwok, Ishfaq Ahmad
CSC
2010
13 years 2 months ago
Performance Modeling, Analysis, and Optimization of Cell-List Based Molecular Dynamics
- We have developed a performance prediction model for non-bonded interaction computations in molecular dynamics simulations, thereby predicting the optimal cell dimension in a lin...
Manaschai Kunaseth, Rajiv K. Kalia, Aiichiro Nakan...
RECOMB
2009
Springer
14 years 8 months ago
Searching Protein 3-D Structures in Linear Time
Finding similar structures from 3-D structure databases of proteins is becoming more and more important issue in the post-genomic molecular biology. To compare 3-D structures of tw...
Tetsuo Shibuya