We introduce a Markov model for the evolution of a gene family along a phylogeny. The model includes parameters for the rates of horizontal gene transfer, gene duplication, and gen...
We present efficient sensitivity-analysis algorithms for two problems involving Markov models of sequence evolution: ancestral reconstruction in evolutionary trees and local ungap...
We analyse the prequential plug-in codes relative to one-parameter exponential families M. We show that if data are sampled i.i.d. from some distribution outside M, then the redund...
We study a random graph Gn that combines certain aspects of geometric random graphs and preferential attachment graphs. The vertices of Gn are n sequentially generated points x1, ...
The goals of this work were to (i) establish a method for building subject-specific biomechanical models from medical image data, (ii) construct a subject-specific model of the elb...
Wendy M. Murray, Allison S. Arnold, Silvia Salinas...