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SIGMOD
2011
ACM
150views Database» more  SIGMOD 2011»
12 years 10 months ago
WHAM: a high-throughput sequence alignment method
Over the last decade the cost of producing genomic sequences has dropped dramatically due to the current so called “next-gen” sequencing methods. However, these next-gen seque...
Yinan Li, Allison Terrell, Jignesh M. Patel
ISCAS
2007
IEEE
161views Hardware» more  ISCAS 2007»
14 years 1 months ago
Hardware Architecture of a Parallel Pattern Matching Engine
Abstract— Several network security and QoS applications require detecting multiple string matches in the packet payload by comparing it against predefined pattern set. This proc...
Meeta Yadav, Ashwini Venkatachaliah, Paul D. Franz...
SIGIR
1998
ACM
13 years 12 months ago
Fast Searching on Compressed Text Allowing Errors
Abstract We present a fast compression and decompression scheme for natural language texts that allows e cient and exible string matching by searching the compressed text directly....
Edleno Silva de Moura, Gonzalo Navarro, Nivio Zivi...
VLDB
2003
ACM
147views Database» more  VLDB 2003»
14 years 7 months ago
RE-tree: an efficient index structure for regular expressions
Due to their expressive power, Regular Expressions (REs) are quickly becoming an integral part of language specifications for several important application scenarios. Many of thes...
Chee Yong Chan, Minos N. Garofalakis, Rajeev Rasto...
ICML
2010
IEEE
13 years 8 months ago
Restricted Boltzmann Machines are Hard to Approximately Evaluate or Simulate
Restricted Boltzmann Machines (RBMs) are a type of probability model over the Boolean cube {-1, 1}n that have recently received much attention. We establish the intractability of ...
Philip M. Long, Rocco A. Servedio