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RECOMB
2006
Springer
14 years 8 months ago
A Parameterized Algorithm for Protein Structure Alignment
This paper proposes a parameterized algorithm for aligning two protein structures, in the case where one protein structure is represented by a contact map graph and the other by a ...
Jinbo Xu, Feng Jiao, Bonnie Berger
ASPDAC
2010
ACM
637views Hardware» more  ASPDAC 2010»
13 years 5 months ago
A new graph-theoretic, multi-objective layout decomposition framework for double patterning lithography
As Double Patterning Lithography(DPL) becomes the leading candidate for sub-30nm lithography process, we need a fast and lithography friendly decomposition framework. In this pape...
Jae-Seok Yang, Katrina Lu, Minsik Cho, Kun Yuan, D...
CVPR
2007
IEEE
14 years 9 months ago
Graph Cut Based Optimization for MRFs with Truncated Convex Priors
Optimization with graph cuts became very popular in recent years. Progress in problems such as stereo correspondence, image segmentation, etc., can be attributed, in part, to the ...
Olga Veksler
JMLR
2006
148views more  JMLR 2006»
13 years 7 months ago
Walk-Sums and Belief Propagation in Gaussian Graphical Models
We present a new framework based on walks in a graph for analysis and inference in Gaussian graphical models. The key idea is to decompose the correlation between each pair of var...
Dmitry M. Malioutov, Jason K. Johnson, Alan S. Wil...
ICALP
2010
Springer
14 years 14 days ago
On the Inapproximability of Vertex Cover on k-Partite k-Uniform Hypergraphs
Computing a minimum vertex cover in graphs and hypergraphs is a well-studied optimizaton problem. While intractable in general, it is well known that on bipartite graphs, vertex c...
Venkatesan Guruswami, Rishi Saket