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» On Applying Set Covering Models to Test Set Compaction
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BMCBI
2010
119views more  BMCBI 2010»
13 years 7 months ago
Functional classification of proteins based on projection of amino acid sequences: application for prediction of protein kinase
Background: The knowledge about proteins with specific interaction capacity to the protein partners is very important for the modeling of cell signaling networks. However, the exp...
Boris Sobolev, Dmitry Filimonov, Alexey Lagunin, A...
GECCO
2006
Springer
188views Optimization» more  GECCO 2006»
13 years 11 months ago
Dynamic multi-objective optimization with evolutionary algorithms: a forward-looking approach
This work describes a forward-looking approach for the solution of dynamic (time-changing) problems using evolutionary algorithms. The main idea of the proposed method is to combi...
Iason Hatzakis, David Wallace
CIBCB
2007
IEEE
13 years 9 months ago
Optimization of Bacterial Strains with Variable-Sized Evolutionary Algorithms
—In metabolic engineering it is difficult to identify which set of genetic manipulations will result in a microbial strain that achieves a desired production goal, due to the co...
Miguel Rocha, José P. Pinto, Isabel Rocha, ...
BMCBI
2007
105views more  BMCBI 2007»
13 years 7 months ago
Finding regulatory elements and regulatory motifs: a general probabilistic framework
Over the last two decades a large number of algorithms has been developed for regulatory motif finding. Here we show how many of these algorithms, especially those that model bind...
Erik van Nimwegen
ACSAC
2004
IEEE
13 years 11 months ago
RACOON: Rapidly Generating User Command Data For Anomaly Detection From Customizable Templates
One of the biggest obstacles faced by user command based anomaly detection techniques is the paucity of data. Gathering command data is a slow process often spanning months or yea...
Ramkumar Chinchani, Aarthie Muthukrishnan, Madhusu...