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    » On Compressibility of Protein Sequences
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    LPAR
    2005
    Springer
    107views Automated Reasoning» more  LPAR 2005»
    A New Constraint Solver for 3D Lattices and Its Application to the Protein Folding Problem
    14 years 1 months ago
    A New Constraint Solver for 3D Lattices and Its Application to the Protein Folding Problem
    Download  www2.unipr.it
    Abstract. The paper describes the formalization and implementation of an efficient constraint programming framework operating on 3D crystal lattices. The framework is motivated an...
    Alessandro Dal Palù, Agostino Dovier, Enric...
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    BMCBI
    2010
    143views more  BMCBI 2010»
    A genome alignment algorithm based on compression
    13 years 5 months ago
    A genome alignment algorithm based on compression
    Download  www.biomedcentral.com
    Background: Traditional genome alignment methods consider sequence alignment as a variation of the string edit distance problem, and perform alignment by matching characters of th...
    Minh Duc Cao, Trevor I. Dix, Lloyd Allison
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    BMCBI
    2007
    135views more  BMCBI 2007»
    RECOVIR: An application package to automatically identify some single stranded RNA viruses using capsid protein residues that un
    13 years 7 months ago
    RECOVIR: An application package to automatically identify some single stranded RNA viruses using capsid protein residues that un
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    Background: Most single stranded RNA (ssRNA) viruses mutate rapidly to generate large number of strains having highly divergent capsid sequences. Accurate strain recognition in un...
    Dianhui Zhu, George E. Fox, Sugoto Chakravarty
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    BMCBI
    2002
    133views more  BMCBI 2002»
    Identification and characterization of subfamily-specific signatures in a large protein superfamily by a hidden Markov model app
    13 years 7 months ago
    Identification and characterization of subfamily-specific signatures in a large protein superfamily by a hidden Markov model app
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    Background: Most profile and motif databases strive to classify protein sequences into a broad spectrum of protein families. The next step of such database studies should include ...
    Kevin Truong, Mitsuhiko Ikura
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    NAR
    2007
    127views more  NAR 2007»
    The Universal Protein Resource (UniProt)
    13 years 7 months ago
    The Universal Protein Resource (UniProt)
    Download  pir.georgetown.edu
    The Universal Protein Resource (UniProt) provides the scientific community with a single, centralized, authoritative resource for protein sequences and functional information. For...
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