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» On Facilitating Automated Evaluation
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BMCBI
2011
13 years 3 months ago
R2R - software to speed the depiction of aesthetic consensus RNA secondary structures
Background: With continuing identification of novel structured noncoding RNAs, there is an increasing need to create schematic diagrams showing the consensus features of these mol...
Zasha Weinberg, Ronald R. Breaker
BMCBI
2011
13 years 3 months ago
nocoRNAc: Characterization of non-coding RNAs in prokaryotes
Background: The interest in non-coding RNAs (ncRNAs) constantly rose during the past few years because of the wide spectrum of biological processes in which they are involved. Thi...
Alexander Herbig, Kay Nieselt
BMCBI
2011
13 years 3 months ago
ATAQS: A computational software tool for high throughput transition optimization and validation for selected reaction monitoring
Background: Since its inception, proteomics has essentially operated in a discovery mode with the goal of identifying and quantifying the maximal number of proteins in a sample. I...
Mi-Youn K. Brusniak, Sung-Tat Kwok, Mark Christian...
NAR
2011
241views Computer Vision» more  NAR 2011»
13 years 3 months ago
PRIDB: a protein-RNA interface database
The Protein–RNA Interface Database (PRIDB) is a comprehensive database of protein–RNA interfaces extracted from complexes in the Protein Data Bank (PDB). It is designed to fac...
Benjamin A. Lewis, Rasna R. Walia, Michael Terribi...
TITB
2010
148views Education» more  TITB 2010»
13 years 2 months ago
Coclustering for cross-subject fiber tract analysis through diffusion tensor imaging
Abstract--One of the fundamental goals of computational neuroscience is the study of anatomical features that reflect the functional organization of the brain. The study of physica...
Cui Lin, Darshan Pai, Shiyong Lu, Otto Muzik, Jing...