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RECOMB
2005
Springer
14 years 9 months ago
An Interaction-Dependent Model for Transcription Factor Binding
Transcriptional regulation is accomplished by several transcription factor proteins that bind to specific DNA elements in the relative vicinity of the gene, and interact with each ...
Li-San Wang, Shane T. Jensen, Sridhar Hannenhalli
SODA
2010
ACM
169views Algorithms» more  SODA 2010»
14 years 6 months ago
Efficiently Decodable Non-adaptive Group Testing
We consider the following "efficiently decodable" nonadaptive group testing problem. There is an unknown string x {0, 1}n with at most d ones in it. We are allowed to t...
Piotr Indyk, Hung Q. Ngo, Atri Rudra
ALT
2006
Springer
14 years 6 months ago
Learning Linearly Separable Languages
This paper presents a novel paradigm for learning languages that consists of mapping strings to an appropriate high-dimensional feature space and learning a separating hyperplane i...
Leonid Kontorovich, Corinna Cortes, Mehryar Mohri
ISQED
2009
IEEE
124views Hardware» more  ISQED 2009»
14 years 4 months ago
Revisiting the linear programming framework for leakage power vs. performance optimization
— This paper revisits and extends a general linear programming(LP) formulation to exploit multiple knobs such as multi-Lgate footprint-compatible libraries and post-layout Lgateb...
Kwangok Jeong, Andrew B. Kahng, Hailong Yao
CIKM
2009
Springer
14 years 3 months ago
Mining linguistic cues for query expansion: applications to drug interaction search
Given a drug under development, what are other drugs or biochemical compounds that it might interact with? Early answers to this question, by mining the literature, are valuable f...
Sheng Guo, Naren Ramakrishnan