Abstract— A Kauffman network is an abstract model of gene regulatory networks. Each gene is represented by a vertex. An edge from one vertex to another implies that the former ge...
This paper presents an evolutionary method for identifying the gene regulatory network from the observed time series data of gene expression using a system of ordinary differential...
Background: An ever increasing number of techniques are being used to find genes with similar profiles from microarray studies. Visualization of gene expression profiles can aid t...
Motivation: There has been considerable interest in developing computational techniques for inferring genetic regulatory networks from whole-genome expression profiles. When expre...
Abstract—In this paper we illustrate scalable parallel performance for the Time Warp synchronization protocol on the L and P variants of the IBM Blue Gene supercomputer. Scalable...
David W. Bauer, Christopher D. Carothers, Akintayo...