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» On genomic coding theory
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BMCBI
2010
108views more  BMCBI 2010»
13 years 5 months ago
BIGSdb: Scalable analysis of bacterial genome variation at the population level
Background: The opportunities for bacterial population genomics that are being realised by the application of parallel nucleotide sequencing require novel bioinformatics platforms...
Keith A. Jolley, Martin C. J. Maiden
BMCBI
2007
145views more  BMCBI 2007»
13 years 7 months ago
Colony size measurement of the yeast gene deletion strains for functional genomics
Background: Numerous functional genomics approaches have been developed to study the model organism yeast, Saccharomyces cerevisiae, with the aim of systematically understanding t...
Negar Memarian, Matthew Jessulat, Javad Alirezaie,...
BMCBI
2004
102views more  BMCBI 2004»
13 years 7 months ago
FRAGS: estimation of coding sequence substitution rates from fragmentary data
Background: Rates of substitution in protein-coding sequences can provide important insights into evolutionary processes that are of biomedical and theoretical interest. Increased...
Estienne C. Swart, Winston A. Hide, Cathal Seoighe
NAR
2011
256views Computer Vision» more  NAR 2011»
12 years 10 months ago
COSMIC: mining complete cancer genomes in the Catalogue of Somatic Mutations in Cancer
COSMIC (http://www.sanger.ac.uk/cosmic) curates comprehensive information on somatic mutations in human cancer. Release v48 (July 2010) describes over 136 000 coding mutations in ...
Simon A. Forbes, Nidhi Bindal, Sally Bamford, Char...
TIT
2002
129views more  TIT 2002»
13 years 7 months ago
Arbitrary source models and Bayesian codebooks in rate-distortion theory
-- We characterize the best achievable performance of lossy compression algorithms operating on arbitrary random sources, and with respect to general distortion measures. Direct an...
Ioannis Kontoyiannis, Junshan Zhang