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» On the Autoreducibility of Random Sequences
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BMCBI
2010
152views more  BMCBI 2010»
13 years 7 months ago
Apples and oranges: avoiding different priors in Bayesian DNA sequence analysis
Background: One of the challenges of bioinformatics remains the recognition of short signal sequences in genomic DNA such as donor or acceptor splice sites, splicing enhancers or ...
Jens Keilwagen, Jan Grau, Stefan Posch, Ivo Grosse
BMCBI
2007
153views more  BMCBI 2007»
13 years 7 months ago
Lower bounds on multiple sequence alignment using exact 3-way alignment
Background: Multiple sequence alignment is fundamental. Exponential growth in computation time appears to be inevitable when an optimal alignment is required for many sequences. E...
Charles J. Colbourn, Sudhir Kumar
PAMI
2007
196views more  PAMI 2007»
13 years 7 months ago
Clustering and Embedding Using Commute Times
This paper exploits the properties of the commute time between nodes of a graph for the purposes of clustering and embedding, and explores its applications to image segmentation a...
Huaijun Qiu, Edwin R. Hancock
RSA
2010
107views more  RSA 2010»
13 years 6 months ago
Continuum limits for classical sequential growth models
A random graph order, also known as a transitive percolation process, is defined by taking a random graph on the vertex set {0, . . . , n − 1}, and putting i below j if there i...
Graham Brightwell, Nicholas Georgiou
SOUPS
2009
ACM
14 years 2 months ago
Games for extracting randomness
Randomness is a necessary ingredient in various computational tasks and especially in Cryptography, yet many existing mechanisms for obtaining randomness suffer from numerous pro...
Ran Halprin, Moni Naor