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» On the Structure of the Minimum Time Function
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113
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JAIR
2006
90views more  JAIR 2006»
15 years 3 months ago
Engineering Benchmarks for Planning: the Domains Used in the Deterministic Part of IPC-4
In a field of research about general reasoning mechanisms, it is essential to have appropriate benchmarks. Ideally, the benchmarks should reflect possible applications of the deve...
Jörg Hoffmann, Stefan Edelkamp, Sylvie Thi&ea...
169
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BMCBI
2005
132views more  BMCBI 2005»
15 years 3 months ago
Kalign - an accurate and fast multiple sequence alignment algorithm
Background: The alignment of multiple protein sequences is a fundamental step in the analysis of biological data. It has traditionally been applied to analyzing protein families f...
Timo Lassmann, Erik L. L. Sonnhammer
134
Voted
BMCBI
2005
116views more  BMCBI 2005»
15 years 3 months ago
Dynamic covariation between gene expression and proteome characteristics
Background: Cells react to changing intra- and extracellular signals by dynamically modulating complex biochemical networks. Cellular responses to extracellular signals lead to ch...
Mansour Taghavi Azar Sharabiani, Markku Siermala, ...
134
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RECOMB
2009
Springer
16 years 4 months ago
An Online Approach for Mining Collective Behaviors from Molecular Dynamics Simulations
Collective behavior involving distally separate regions in a protein is known to widely affect its function. In this paper, we present an online approach to study and characterize ...
Arvind Ramanathan, Pratul K. Agarwal, Maria Kurnik...
127
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SOFSEM
2009
Springer
16 years 18 days ago
Weaknesses of Cuckoo Hashing with a Simple Universal Hash Class: The Case of Large Universes
Cuckoo hashing was introduced by Pagh and Rodler in 2001 [12]. A set S of n keys is stored in two tables T1 and T2 each of which has m cells of capacity 1 such that constant access...
Martin Dietzfelbinger, Ulf Schellbach