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» On the memory complexity of the forward-backward algorithm
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ICCMS
2009
118views more  ICCMS 2009»
13 years 5 months ago
Optimized Parallel Implementation of Gillespie's First Reaction Method on Graphics Processing Units
The simulation of chemical reacting systems is one of the most challenging topics in Systems Biology, due to their complexity and inherent randomness. The Gillespie's Stochas...
Cristian Dittamo, Davide Cangelosi
SIAMCOMP
2010
97views more  SIAMCOMP 2010»
13 years 2 months ago
Lower Bounds for Randomized Consensus under a Weak Adversary
This paper studies the inherent trade-off between termination probability and total step complexity of randomized consensus algorithms. It shows that for every integer k, the prob...
Hagit Attiya, Keren Censor-Hillel
CC
2006
Springer
182views System Software» more  CC 2006»
13 years 11 months ago
Selective Runtime Memory Disambiguation in a Dynamic Binary Translator
Abstract. Alias analysis, traditionally performed statically, is unsuited for a dynamic binary translator (DBT) due to incomplete control-flow information and the high complexity o...
Bolei Guo, Youfeng Wu, Cheng Wang, Matthew J. Brid...
IPPS
2007
IEEE
14 years 2 months ago
Reconfigurable Architecture for Biological Sequence Comparison in Reduced Memory Space
DNA sequence alignment is a very important problem in bioinformatics. The algorithm proposed by Smith-Waterman (SW) is an exact method that obtains optimal local alignments in qua...
Azzedine Boukerche, Jan Mendonca Correa, Alba Cris...
JRTIP
2008
118views more  JRTIP 2008»
13 years 7 months ago
Custom parallel caching schemes for hardware-accelerated image compression
Abstract In an effort to achieve lower bandwidth requirements, video compression algorithms have become increasingly complex. Consequently, the deployment of these algorithms on Fi...
Su-Shin Ang, George A. Constantinides, Wayne Luk, ...