Sciweavers

96 search results - page 10 / 20
» Optimal neighborhood indexing for protein similarity search
Sort
View
FGCS
2007
107views more  FGCS 2007»
13 years 8 months ago
Algorithmic re-structuring and data replication for protein structure comparison on a GRID
This paper describes a major restructuring of PROuST, a method for protein structure comparison, for an efficient porting to the Grid. PROuST consists of different components: an...
Giovanni Ciriello, M. Comin, Concettina Guerra
CIKM
2010
Springer
13 years 7 months ago
Improved index compression techniques for versioned document collections
Current Information Retrieval systems use inverted index structures for efficient query processing. Due to the extremely large size of many data sets, these index structures are u...
Jinru He, Junyuan Zeng, Torsten Suel
BMCBI
2004
95views more  BMCBI 2004»
13 years 8 months ago
PCOGR: Phylogenetic COG ranking as an online tool to judge the specificity of COGs with respect to freely definable groups of or
Background: The rapidly increasing number of completely sequenced genomes led to the establishment of the COG-database which, based on sequence homologies, assigns similar protein...
Florian Meereis, Michael Kaufmann
BMCBI
2007
166views more  BMCBI 2007»
13 years 8 months ago
Optimization of filtering criterion for SEQUEST database searching to improve proteome coverage in shotgun proteomics
Background: In proteomic analysis, MS/MS spectra acquired by mass spectrometer are assigned to peptides by database searching algorithms such as SEQUEST. The assignations of pepti...
Xinning Jiang, Xiaogang Jiang, Guanghui Han, Mingl...
VLDB
2002
ACM
124views Database» more  VLDB 2002»
14 years 8 months ago
Efficient retrieval of similar shapes
Abstract. We propose an indexing technique for the fast retrieval of objects in 2D images based on similarity between their boundary shapes. Our technique is robust in the presence...
Davood Rafiei, Alberto O. Mendelzon