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» P systems applications to systems biology
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SIGSOFT
1994
ACM
14 years 2 months ago
Reengineering a Complex Application Using a Scalable Data Structure Compiler
1 P2 is a scalable compiler for collection data structures. High-level ions insulate P2 users from data structure implementation details. By specifying a target data structure as a...
Don S. Batory, Jeff Thomas, Marty Sirkin
ECCB
2005
IEEE
14 years 3 months ago
A query language for biological networks
Many areas of modern biology are concerned with the management, storage, visualization, comparison, and analysis of networks. For instance, networks are used to model signal trans...
Ulf Leser
AIPS
2003
13 years 11 months ago
A Multi-Agent System-driven AI Planning Approach to Biological Pathway Discovery
As genomic and proteomic data is collected from highthroughput methods on a daily basis, subcellular components are identified and their in vitro behavior is characterized. Howev...
Salim Khan, William Gillis, Carl Schmidt, Keith De...
BMCBI
2007
145views more  BMCBI 2007»
13 years 10 months ago
BioPP: a tool for web-publication of biological networks
Background: Cellular processes depend on the function of intracellular molecular networks. The curation of the literature relevant to specific biological pathways is important for...
Ganesh A. Viswanathan, German Nudelman, Sonali Pat...
BMCBI
2004
144views more  BMCBI 2004»
13 years 10 months ago
PASBio: predicate-argument structures for event extraction in molecular biology
Background: The exploitation of information extraction (IE), a technology aiming to provide instances of structured representations from free-form text, has been rapidly growing w...
Tuangthong Wattarujeekrit, Parantu K. Shah, Nigel ...