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BMCBI
2008
187views more  BMCBI 2008»
13 years 10 months ago
PSAT: A web tool to compare genomic neighborhoods of multiple prokaryotic genomes
Background: The conservation of gene order among prokaryotic genomes can provide valuable insight into gene function, protein interactions, or events by which genomes have evolved...
Christine Fong, Laurence Rohmer, Matthew Radey, Mi...
MMB
2010
Springer
180views Communications» more  MMB 2010»
14 years 23 hour ago
ResiLyzer: A Tool for Resilience Analysis in Packet-Switched Communication Networks
We present a tool for the analysis of fault-tolerance in packet-switched communication networks. Network elements like links or routers can fail or unexpected traffic surges may o...
David Hock, Michael Menth, Matthias Hartmann, Chri...
BMCBI
2007
121views more  BMCBI 2007»
13 years 10 months ago
Development of an epitope conservancy analysis tool to facilitate the design of epitope-based diagnostics and vaccines
Background: In an epitope-based vaccine setting, the use of conserved epitopes would be expected to provide broader protection across multiple strains, or even species, than epito...
Huynh-Hoa Bui, John Sidney, Wei Li, Nicholas Fusse...
BMCBI
2006
146views more  BMCBI 2006»
13 years 10 months ago
GeneTools - application for functional annotation and statistical hypothesis testing
Background: Modern biology has shifted from "one gene" approaches to methods for genomic-scale analysis like microarray technology, which allow simultaneous measurement ...
Vidar Beisvag, Frode K. R. Jünge, Hallgeir Be...
BMCBI
2007
133views more  BMCBI 2007»
13 years 10 months ago
MATLIGN: a motif clustering, comparison and matching tool
Background: Sequence motifs representing transcription factor binding sites (TFBS) are commonly encoded as position frequency matrices (PFM) or degenerate consensus sequences (CS)...
Matti Kankainen, Ari Löytynoja