One of the criteria for inferring a species tree from a collection of gene trees, when gene tree incongruence is assumed to be due to incomplete lineage sorting (ILS), is minimize ...
Dynamic Bayesian networks are structured representations of stochastic processes. Despite their structure, exact inference in DBNs is generally intractable. One approach to approx...
The Temporal Restricted Boltzmann Machine (TRBM) is a probabilistic model for sequences that is able to successfully model (i.e., generate nice-looking samples of) several very hi...
Ilya Sutskever, Geoffrey E. Hinton, Graham W. Tayl...
Abstract –In this paper, a variational message passing framework is proposed for Markov random fields, which is computationally more efficient and admits wider applicability comp...
In this paper, we introduce EXACT, the EXperimental Algorithmics Computational Toolkit. EXACT is a software framework for describing, controlling, and analyzing computer experimen...
William E. Hart, Jonathan W. Berry, Robert T. Heap...