4759 search results - page 11 / 952 » Parallelizing the Phylogeny Problem |
RECOMB
2000
Springer
13 years 11 months ago
2000
Springer
We present a general heuristicfor the median problem for induced breakpoints on genomes with unequal gene content and incorporate this into a routine for estimating optimal gene o...
TCBB
2008
13 years 7 months ago
2008
Under a stochastic model of molecular sequence evolution the probability of each possible pattern of characters is well defined. The Kimura's three-substitution-types (K3ST) m...
BMCBI
2006
13 years 7 months ago
2006
Background: Orthologs (genes that have diverged after a speciation event) tend to have similar function, and so their prediction has become an important component of comparative g...
PLDI
2011
ACM
12 years 10 months ago
2011
ACM
In writing parallel programs, programmers expose parallelism and optimize it to meet a particular performance goal on a single platform under an assumed set of workload characteri...
RECOMB
2006
Springer
14 years 8 months ago
2006
Springer
We study the problem of enumerating substrings that are common amongst genomes that share evolutionary descent. For example, one might want to enumerate all identical (therefore co...