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» Parallelizing the Phylogeny Problem
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VECPAR
2004
Springer
14 years 1 months ago
Domain Decomposition Methods for PDE Constrained Optimization Problems
Abstract. Optimization problems constrained by nonlinear partial differential equations have been the focus of intense research in scientific computing lately. Current methods for...
Ernesto E. Prudencio, Richard H. Byrd, Xiao-Chuan ...
ISBRA
2010
Springer
14 years 2 months ago
"Master-Slave" Biological Network Alignment
d abstract), Nicola Ferraro, Luigi Palopoli, Simona Panni and Simona E. Rombo. Uncovering Hidden Phylogenetic Consensus d abstract), Nicholas Pattengale, Krister Swenson and Bernar...
Nicola Ferraro, Luigi Palopoli, Simona Panni, Simo...
STOC
1996
ACM
92views Algorithms» more  STOC 1996»
13 years 12 months ago
Constructing Evolutionary Trees in the Presence of Polymorphic Characters
Abstract. Most phylogenetics literature and construction methods based upon characters presume monomorphism (one state per character per species), yet polymorphism (multiple states...
Maria Luisa Bonet, Cynthia A. Phillips, Tandy Warn...
APBC
2004
132views Bioinformatics» more  APBC 2004»
13 years 9 months ago
Identifying Character Non-Independence in Phylogenetic Data Using Data Mining Techniques
Undiscovered relationships in a data set may confound analyses, particularly those that assume data independence. Such problems occur when characters used for phylogenetic analyse...
Anne M. Maglia, Jennifer L. Leopold, Venkat Ram Gh...
WOB
2004
13 years 9 months ago
A Multi-Neighbor-Joining Approach for Phylogenetic Tree Reconstruction and Visualization
ABSTRACT. The computationally challenging problem of reconstructing the phylogeny of a set of contemporary data, such as DNA sequences or morphological attributes, was treated by a...
Ana Estela Antunes da Silva, Wilfredo J. Puma-Vill...