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    BMCBI
    2005
    85views more  BMCBI 2005»
    Processing methods for differential analysis of LC/MS profile data
    13 years 8 months ago
    Processing methods for differential analysis of LC/MS profile data
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    Background: Liquid chromatography coupled to mass spectrometry (LC/MS) has been widely used in proteomics and metabolomics research. In this context, the technology has been incre...
    Mikko Katajamaa, Matej Oresic
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    VIS
    2005
    IEEE
    204views Visualization» more  VIS 2005»
    Differential Protein Expression Analysis via Liquid-Chromatography/Mass-Spectrometry Data Visualization
    14 years 9 months ago
    Differential Protein Expression Analysis via Liquid-Chromatography/Mass-Spectrometry Data Visualization
    Download  www.faculty.iu-bremen.de
    Differential protein expression analysis is one of the main challenges in proteomics. It denotes the search for proteins, whose encoding genes are differentially expressed under a...
    Lars Linsen, Julia Löcherbach, Matthias Berth...
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    BMCBI
    2010
    193views more  BMCBI 2010»
    MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
    13 years 8 months ago
    MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
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    Background: Mass spectrometry (MS) coupled with online separation methods is commonly applied for differential and quantitative profiling of biological samples in metabolomic as w...
    Tomás Pluskal, Sandra Castillo, Alejandro V...
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    BMCBI
    2004
    142views more  BMCBI 2004»
    GOTree Machine (GOTM): a web-based platform for interpreting sets of interesting genes using Gene Ontology hierarchies
    13 years 8 months ago
    GOTree Machine (GOTM): a web-based platform for interpreting sets of interesting genes using Gene Ontology hierarchies
    Download  www.biomedcentral.com
    Background: Microarray and other high-throughput technologies are producing large sets of interesting genes that are difficult to analyze directly. Bioinformatics tools are needed...
    Bing Zhang, Denise Schmoyer, Stefan Kirov, Jay Sno...
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    BMCBI
    2007
    127views more  BMCBI 2007»
    The EIPeptiDi tool: enhancing peptide discovery in ICAT-based LC MS/MS experiments
    13 years 8 months ago
    The EIPeptiDi tool: enhancing peptide discovery in ICAT-based LC MS/MS experiments
    Download  www.biomedcentral.com
    Background: Isotope-coded affinity tags (ICAT) is a method for quantitative proteomics based on differential isotopic labeling, sample digestion and mass spectrometry (MS). The me...
    Mario Cannataro, Giovanni Cuda, Marco Gaspari, Ser...
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