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» Patterns for Refinement Automation
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BMCBI
2006
182views more  BMCBI 2006»
13 years 6 months ago
AceTree: a tool for visual analysis of Caenorhabditis elegans embryogenesis
Background: The invariant lineage of the nematode Caenorhabditis elegans has potential as a powerful tool for the description of mutant phenotypes and gene expression patterns. We...
Thomas J. Boyle, Zhirong Bao, John I. Murray, Carl...
BMCBI
2006
113views more  BMCBI 2006»
13 years 6 months ago
GibbsST: a Gibbs sampling method for motif discovery with enhanced resistance to local optima
Background: Computational discovery of transcription factor binding sites (TFBS) is a challenging but important problem of bioinformatics. In this study, improvement of a Gibbs sa...
Kazuhito Shida
BMCBI
2007
133views more  BMCBI 2007»
13 years 6 months ago
Semi-supervised learning for the identification of syn-expressed genes from fused microarray and in situ image data
Background: Gene expression measurements during the development of the fly Drosophila melanogaster are routinely used to find functional modules of temporally co-expressed genes. ...
Ivan G. Costa, Roland Krause, Lennart Opitz, Alexa...
SDM
2011
SIAM
218views Data Mining» more  SDM 2011»
12 years 9 months ago
Segmented nestedness in binary data
A binary matrix is fully nested if its columns form a chain of subsets; that is, any two columns are ordered by the subset relation, where we view each column as a subset of the r...
Esa Junttila, Petteri Kaski
CIKM
2011
Springer
12 years 6 months ago
LogSig: generating system events from raw textual logs
Modern computing systems generate large amounts of log data. System administrators or domain experts utilize the log data to understand and optimize system behaviors. Most system ...
Liang Tang, Tao Li, Chang-Shing Perng