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SSDBM
1999
IEEE
86views Database» more  SSDBM 1999»
14 years 28 days ago
A Query System in a Biological Database
In this paper, we present a query system that has been implemented in a practical biological database - GPCRDB. Distinguishing features of this system include: smart query relaxat...
Dunren Che, Yangjun Chen, Karl Aberer
SIGMETRICS
2008
ACM
130views Hardware» more  SIGMETRICS 2008»
13 years 8 months ago
Using probabilistic model checking in systems biology
Probabilistic model checking is a formal verification framework for systems which exhibit stochastic behaviour. It has been successfully applied to a wide range of domains, includ...
Marta Z. Kwiatkowska, Gethin Norman, David Parker
GECCO
2004
Springer
150views Optimization» more  GECCO 2004»
14 years 2 months ago
Systems Biology Modeling in Human Genetics Using Petri Nets and Grammatical Evolution
Understanding the hierarchical relationships among biochemical, metabolic, and physiological systems in the mapping between genotype and phenotype is expected to improve the diagno...
Jason H. Moore, Lance W. Hahn
BMCBI
2007
100views more  BMCBI 2007»
13 years 8 months ago
SBMLeditor: effective creation of models in the Systems Biology Markup Language (SBML)
Background: The need to build a tool to facilitate the quick creation and editing of models encoded in the Systems Biology Markup language (SBML) has been growing with the number ...
Nicolas Rodriguez, Marco Donizelli, Nicolas Le Nov...
CMSB
2009
Springer
14 years 3 months ago
A Bayesian Approach to Model Checking Biological Systems
Recently, there has been considerable interest in the use of Model Checking for Systems Biology. Unfortunately, the state space of stochastic biological models is often too large f...
Sumit Kumar Jha, Edmund M. Clarke, Christopher Jam...