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» Phylogenetic Comparative Assembly
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NAR
2002
80views more  NAR 2002»
13 years 7 months ago
Wanda: a database of duplicated fish genes
Comparative genomics has shown that ray-finned fish (Actinopterygii) contain more copies of many genes than other vertebrates. A large number of these additional genes appear to h...
Yves Van de Peer, John Shawe-Taylor, Jayabalan Jos...
NAR
2007
65views more  NAR 2007»
13 years 6 months ago
STRING 7 - recent developments in the integration and prediction of protein interactions
Information on protein–protein interactions is still mostly limited to a small number of model organisms, and originates from a wide variety of experimental and computational te...
Christian von Mering, Lars Juhl Jensen, Michael Ku...
JCIT
2010
113views more  JCIT 2010»
13 years 2 months ago
On Deriving an Equation of the Mutation Rate of the Hepatitis B Virus
The mutation rate of the hepatitis B virus (HBV) is often obtained by statistical software. This is restricted to the sampled data and cannot be applied to other cases. This limit...
Koun-Tem Sun, Chih-Hsuan Wei, Yi-Yu Hsu, Wen-Chun ...
BMCBI
2008
99views more  BMCBI 2008»
13 years 7 months ago
Binning sequences using very sparse labels within a metagenome
Background: In metagenomic studies, a process called binning is necessary to assign contigs that belong to multiple species to their respective phylogenetic groups. Most of the cu...
Chon-Kit Kenneth Chan, Arthur L. Hsu, Saman K. Hal...
RECOMB
2008
Springer
14 years 7 months ago
Reconstructing the Evolutionary History of Complex Human Gene Clusters
Abstract. Clusters of genes that evolved from single progenitors via repeated segmental duplications present significant challenges to the generation of a truly complete human geno...
Adam C. Siepel, Eric D. Green, Giltae Song, Tom&aa...