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» Physics-based simulation of biological structures
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JCB
2002
131views more  JCB 2002»
13 years 7 months ago
Modeling and Simulation of Genetic Regulatory Systems: A Literature Review
In order to understand the functioning of organisms on the molecular level, we need to know which genes are expressed, when and where in the organism, and to which extent. The reg...
Hidde de Jong
RECOMB
2011
Springer
12 years 10 months ago
Algorithms for MDC-Based Multi-locus Phylogeny Inference
One of the criteria for inferring a species tree from a collection of gene trees, when gene tree incongruence is assumed to be due to incomplete lineage sorting (ILS), is minimize ...
Yun Yu, Tandy Warnow, Luay Nakhleh
VLSID
2008
IEEE
95views VLSI» more  VLSID 2008»
14 years 8 months ago
A New Threshold Voltage Model for Omega Gate Cylindrical Nanowire Transistor
In this work, for the first time, we present a physically based analytical threshold voltage model for omega gate silicon nanowire transistor. This model is developed for long cha...
Biswajit Ray, Santanu Mahapatra
SIGGRAPH
2010
ACM
14 years 2 days ago
A novel algorithm for incompressible flow using only a coarse grid projection
Large scale fluid simulation can be difficult using existing techniques due to the high computational cost of using large grids. We present a novel technique for simulating deta...
Michael Lentine, Wen Zheng, Ronald Fedkiw
BMCBI
2006
101views more  BMCBI 2006»
13 years 7 months ago
SynTReN: a generator of synthetic gene expression data for design and analysis of structure learning algorithms
Background: The development of algorithms to infer the structure of gene regulatory networks based on expression data is an important subject in bioinformatics research. Validatio...
Tim Van den Bulcke, Koen Van Leemput, Bart Naudts,...