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BMCBI
2006
116views more  BMCBI 2006»
13 years 7 months ago
HotSwap for bioinformatics: A STRAP tutorial
Background: Bioinformatics applications are now routinely used to analyze large amounts of data. Application development often requires many cycles of optimization, compiling, and...
Christoph Gille, Peter N. Robinson
BMCBI
2006
152views more  BMCBI 2006»
13 years 7 months ago
Amplification of the Gene Ontology annotation of Affymetrix probe sets
Background: The annotations of Affymetrix DNA microarray probe sets with Gene Ontology terms are carefully selected for correctness. This results in very accurate but incomplete a...
Enrique M. Muro, Carolina Perez-Iratxeta, Miguel A...
BMCBI
2006
128views more  BMCBI 2006»
13 years 7 months ago
Lexical adaptation of link grammar to the biomedical sublanguage: a comparative evaluation of three approaches
Background: We study the adaptation of Link Grammar Parser to the biomedical sublanguage with a focus on domain terms not found in a general parser lexicon. Using two biomedical c...
Sampo Pyysalo, Tapio Salakoski, Sophie Aubin, Adel...
ENTCS
2006
183views more  ENTCS 2006»
13 years 7 months ago
Metamodel-Based Model Transformation with Aspect-Oriented Constraints
Model transformation means converting an input model available at the beginning of the transformation process to an output model. A widely used approach to model transformation us...
László Lengyel, Tihamer Levendovszky...
BMCBI
2007
157views more  BMCBI 2007»
13 years 7 months ago
Statistical learning of peptide retention behavior in chromatographic separations: a new kernel-based approach for computational
Background: High-throughput peptide and protein identification technologies have benefited tremendously from strategies based on tandem mass spectrometry (MS/MS) in combination wi...
Nico Pfeifer, Andreas Leinenbach, Christian G. Hub...