291 search results - page 27 / 59 » Progressive multiple sequence alignments from triplets |
BMCBI
2007
13 years 7 months ago
2007
Background: Over the past decade, a number of tools have emerged for the examination of homology relationships among protein sequences in a structural context. Most recent softwar...
CSB
2003
IEEE
14 years 27 days ago
2003
IEEE
This paper describes a new strategy for designing degenerate primers for a given multiple alignment of amino acid sequences. Degenerate primers are useful for amplifying homologou...
ECCB
2008
IEEE
14 years 2 months ago
2008
IEEE
Motivation: Mapping of remote evolutionary links is a classic computational problem of much interest. Relating protein families allows for functional and structural inference on u...
BMCBI
2006
13 years 7 months ago
2006
Background: Until today, analysis of 16S ribosomal RNA (rRNA) sequences has been the de-facto gold standard for the assessment of phylogenetic relationships among prokaryotes. How...
GCB
2000
Springer
13 years 11 months ago
2000
Springer
Conventional phylogenetic tree estimation methods assume that all sites in a DNA multiple alignment have the same evolutionary history. This assumption is violated in data sets fro...